Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Oligopeptide transport ATP-binding protein OppF from Xanthobacter sp. DMC5

 Score =  178 bits (451), Expect = 1e-49
 Identities = 95/252 (37%), Positives = 154/252 (61%), Gaps = 8/252 (3%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           LL V NLH  + +    LR     AV  VSF +E G+T+G +G++G GKS+LA+++  +V
Sbjct: 3   LLSVENLHAGYESGGRLLR-----AVDGVSFAVEPGETVGLVGESGCGKSSLAKVIMRLV 57

Query: 64  APTGGEIRVNGEL---LEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSM 120
           +P  G +  +G     LE        +  +++FQDP  SLNPR  I  IL  PL  +  +
Sbjct: 58  SPASGRVVFDGVDVGGLEGAPLKAYRRQAQIVFQDPFASLNPRQSIADILTAPLAVHGLV 117

Query: 121 TPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGL 180
               R++   D L+RVGL  E    YP   + GQ+QR+ +ARALIL P ++I DE ++ L
Sbjct: 118 PRGERLKAAGDALERVGLPREALSRYPHEFSGGQRQRLGIARALILFPRLVICDEPVSAL 177

Query: 181 DMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLAD 240
           D+++++QILNL   L+ E+G+S++++S  + V+++  D+++VM+ G +VE+G    + A 
Sbjct: 178 DLSIQAQILNLLARLKAELGLSYLFISHDLSVVRYFADRVLVMYLGRIVETGSWQSIFAR 237

Query: 241 PQHPITQRMIES 252
           P HP T+ +IE+
Sbjct: 238 PLHPYTRALIEA 249