Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 1e-55
 Identities = 100/262 (38%), Positives = 169/262 (64%), Gaps = 4/262 (1%)

Query: 1   MSALLEVTNLHKDF-VTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARML 59
           M+ +L   +L + + V+R  F       A+  VSF LEAG+T+  +G++G GKSTLAR L
Sbjct: 1   MAVVLTARDLTRHYEVSRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 60  AGMVAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
             +  P+ G +++ G+ +   D + R +L   ++M+FQ P  SLNPR ++G  L  PL  
Sbjct: 61  TLIEEPSSGSLKIAGQEVAGADKAQRKQLRKDVQMVFQSPYASLNPRQKVGDQLAEPLLI 120

Query: 117 NTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEA 176
           NT+++   R  +V+  +++VGL PEH   YP M + GQ+QR+ LARA++LQP +++ADE 
Sbjct: 121 NTNLSAAERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 177 LNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHE 236
            + LD+++++Q+LNLF++LQ+E   ++V++S ++ V++H+ D ++VM+ G  VE G   +
Sbjct: 181 TSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVGPKED 240

Query: 237 VLADPQHPITQRMIESHFTKAP 258
           + A P HP TQ ++ +  T  P
Sbjct: 241 IYARPLHPYTQALLSATPTIHP 262