Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 9e-49
 Identities = 87/230 (37%), Positives = 141/230 (61%), Gaps = 2/230 (0%)

Query: 22  RKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTGGEIRVNG-ELLEHK 80
           ++Q    V   S  +  G+T+  +G +GSGK+TL R L G++ P  G IR  G ++L+  
Sbjct: 294 KRQHTRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAA 353

Query: 81  DYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGLLP 140
           + + R +  +MIFQDP +SLNPR++IG IL  PL+    +    R  RV  TL+ +GL  
Sbjct: 354 NRTHRLQC-QMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGE 412

Query: 141 EHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEEMG 200
           +    +P  L+ GQ+QRV + RAL+  P ++IADE ++ LDM ++ QIL LF  LQ + G
Sbjct: 413 QFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYG 472

Query: 201 VSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMI 250
            + +++S  +  ++ I  ++ VMH+G+VVE G   ++   PQHP T++++
Sbjct: 473 FACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLL 522



 Score =  128 bits (321), Expect = 3e-34
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 10/235 (4%)

Query: 28  AVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVA----PTGGEIRVNGELLEHKDYS 83
           AV  +SF++  G+ +  +G++GSGK+  AR   G++       GG +   G  L      
Sbjct: 24  AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDFQGRDLASVSTE 83

Query: 84  T----RCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGLL 139
                R   I M+FQ+P  SLNP L+IG  +   LK +T + P     R    L+R+G+ 
Sbjct: 84  ALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRRIGIK 143

Query: 140 PEHAYF--YPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQE 197
                   YP   + G +QR+ LA  ++L+P+++IADE    LD   +  ++ L LEL  
Sbjct: 144 AAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELMLELTR 203

Query: 198 EMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMIES 252
           E G + +++S  + ++     K++VM  G  VE G   ++L  P+   T++++E+
Sbjct: 204 EQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYTRQLLEA 258