Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  187 bits (474), Expect = 6e-52
 Identities = 96/250 (38%), Positives = 157/250 (62%), Gaps = 7/250 (2%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           LL V +L  D+  R G     + HAV  VSF + AG+T+G +G++G GKSTL+R L  +V
Sbjct: 320 LLSVQDLRTDYPKRGG----GVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLV 375

Query: 64  APTGGEIRVNGE---LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSM 120
            P  G I  +G     L  K      + ++M+FQDP  SLNPR  +  I+E  LK +   
Sbjct: 376 NPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKVHGVA 435

Query: 121 TPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGL 180
               R  R+   L+RVGL  +    +P   + GQ+QR+ +ARAL+L+PS+++ DE ++ L
Sbjct: 436 DRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDEPVSAL 495

Query: 181 DMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLAD 240
           D+++++QILNL +EL+E+ G+S++++S  + V+++I D+++VM +G +VE+G   ++   
Sbjct: 496 DVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHRDIWDR 555

Query: 241 PQHPITQRMI 250
           PQHP T+ +I
Sbjct: 556 PQHPYTRSLI 565



 Score =  130 bits (328), Expect = 5e-35
 Identities = 82/256 (32%), Positives = 141/256 (55%), Gaps = 14/256 (5%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           LL+V  L   F+  +G ++     AV+ +  TL+ G+T+  +G++G GKST A  L  ++
Sbjct: 13  LLDVRGLDVFFLGSNGPVQ-----AVRGLDLTLQRGETLALVGESGCGKSTTALALLRLL 67

Query: 64  APTG---GEIRVNGE----LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKR 116
           AP     G I+ +G     L   +    R + I MIFQ+P TSLNP   IGT +E  L+R
Sbjct: 68  APGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRR 127

Query: 117 NTSMTPEARMRRVKDTLQRVGLLPEHAYF--YPQMLATGQKQRVCLARALILQPSIIIAD 174
           +  ++  A  +R  + L  V +   H     +P  L+ GQ+QRV +A A+  +P +++AD
Sbjct: 128 HEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVAD 187

Query: 175 EALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGET 234
           E    LD+ +++QIL L   L+ E+ ++ + ++  +G++    D++ VM+ G+ VE   T
Sbjct: 188 EPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEAST 247

Query: 235 HEVLADPQHPITQRMI 250
             + A P H  T+ ++
Sbjct: 248 SRLFAAPSHAYTRGLL 263