Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  198 bits (504), Expect = 1e-55
 Identities = 98/253 (38%), Positives = 163/253 (64%), Gaps = 4/253 (1%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQ-HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           ++E TNL + +  R G  R      AV  +SF +E G+T+  +G++G GKSTLARM+A +
Sbjct: 9   VVEATNLQRTYDIRRGLFRAPSHLRAVGDISFRIERGRTLAVVGESGCGKSTLARMVALI 68

Query: 63  VAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKRNTS 119
             PT G++ + G          + +L   ++++FQ+P  SLNPR +I  +LE PL  NT+
Sbjct: 69  EKPTAGQLTLVGTDAVDTPAERKRELRQAVQLVFQNPYGSLNPRKKISAVLEDPLAINTT 128

Query: 120 MTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNG 179
           M  + R  + ++ L RVGL PE+A  YP M + GQ+QR+ +ARAL+L P +++ADE ++ 
Sbjct: 129 MGKQERAAKAREMLARVGLRPEYANRYPHMFSGGQRQRIAIARALMLNPRLLVADEPVSA 188

Query: 180 LDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLA 239
           LD+++++Q+LNL  +LQ E+G++++++S  +GV++HI   ++VM+ G  VE G    + +
Sbjct: 189 LDVSIQAQVLNLLADLQAELGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPKSRIFS 248

Query: 240 DPQHPITQRMIES 252
            P HP TQ ++ S
Sbjct: 249 RPLHPYTQALLAS 261