Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  177 bits (448), Expect = 3e-49
 Identities = 88/232 (37%), Positives = 153/232 (65%), Gaps = 7/232 (3%)

Query: 27  HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTGGEIRVNGELLEHKDYSTR- 85
           HAV  VSF++E G+T+  +G++G GKST+AR+L G+ APT G ++ +G+   H  + T  
Sbjct: 49  HAVDGVSFSIERGKTLALVGESGCGKSTVARLLVGLYAPTRGGLQFDGQDA-HAAFKTSE 107

Query: 86  ----CKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMR-RVKDTLQRVGLLP 140
                + I+MIFQDP  SLNPR  +  I+  PL+ +  ++ +A +R RV + L+ VGL P
Sbjct: 108 GRKLRRRIQMIFQDPYASLNPRWIVEDIIGEPLREHGIISDKAALRERVGELLKSVGLSP 167

Query: 141 EHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEEMG 200
                YP   + GQ+QR+ +ARAL  QP  ++ DE  + LD+++++Q+LN+  +LQ E G
Sbjct: 168 LDMSKYPHQFSGGQRQRISIARALATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQREQG 227

Query: 201 VSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMIES 252
           ++++++S ++ V++H+ D++ VM+ G +VE  +  ++ A PQHP T+ ++++
Sbjct: 228 LTYLFISHNLAVVRHVADQVGVMYLGRLVEVADKQKLFAAPQHPYTRMLLDA 279