Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  180 bits (456), Expect = 6e-50
 Identities = 95/253 (37%), Positives = 151/253 (59%), Gaps = 9/253 (3%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQI-QHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           +LEV  L  DF    G L K+  + A+K +   +  G+ +  +G +GSGK+TL R +AG+
Sbjct: 275 ILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGL 334

Query: 63  VAPTGGEIRVNGELLEHKD-----YSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRN 117
           + P+GG I   G+ +  +      Y  +C+   M+FQDP +SL+PR+ +G  +   L   
Sbjct: 335 LQPSGGRILFEGKGIARRSEGWARYRAQCQ---MVFQDPASSLDPRMTVGASIGEALTGM 391

Query: 118 TSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEAL 177
             +TP AR  R+ + LQ V L  E A  YP  L+ GQ+QRV +ARA++ +P+ I+ADE +
Sbjct: 392 PGLTPAARRGRILEVLQEVSLPAEVASRYPHELSGGQRQRVAIARAVVRRPAFIVADEPV 451

Query: 178 NGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEV 237
           + LD+ +R+QIL LF +LQ   G S +++S  + V++ I D++IVM  G++VE G   EV
Sbjct: 452 SALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVEQGPRDEV 511

Query: 238 LADPQHPITQRMI 250
              P H  T+ ++
Sbjct: 512 FDRPHHDYTRELL 524



 Score =  147 bits (370), Expect = 6e-40
 Identities = 80/240 (33%), Positives = 139/240 (57%), Gaps = 10/240 (4%)

Query: 29  VKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAP----TGGEIRVNGELLEHKDYST 84
           V  +SF +  G+ IG +G++GSGK+  AR L G+  P    T G I  +G+ +       
Sbjct: 26  VHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRTAGSIVFDGQEVTALSAGA 85

Query: 85  RCKL----IRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGLLP 140
             KL    I M+FQ+P TSLNP + IG  L+  L  +T+++P  R  R+ + L+RV +  
Sbjct: 86  LRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSPAQRRARILEMLERVRIQD 145

Query: 141 EHAYF--YPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEE 198
             A    YP   + G +QR+ LA A++L+PS++IADE    LD  ++ ++++L +EL  +
Sbjct: 146 PAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTALDAVVQREVMDLMVELTRD 205

Query: 199 MGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMIESHFTKAP 258
            G + + +S  + ++   TD+++VMH G +VES  T  +++ P+   T++++ +  T+ P
Sbjct: 206 HGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSAPREDYTRKLLAAMPTRGP 265