Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  178 bits (451), Expect = 3e-49
 Identities = 88/230 (38%), Positives = 150/230 (65%), Gaps = 5/230 (2%)

Query: 25  IQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTGGEIRVNGE----LLEHK 80
           + HAV  V  ++  G+ +G +G++G GKSTL R+ AG++ PT GE+ V G+    L   +
Sbjct: 393 VTHAVDVVDLSVRPGEVVGLVGESGCGKSTLGRIAAGLLTPTEGEVIVGGKPVASLSAQE 452

Query: 81  DYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGLLP 140
             + R + I+M+FQDP  SLNPRL++  I+      +       +   V   L+R GL P
Sbjct: 453 QLAARLR-IQMVFQDPYASLNPRLRVSRIVGEAAMLHGLTDAAGQDDYVCAQLERAGLDP 511

Query: 141 EHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEEMG 200
              + YP   + GQ+QR+ +ARAL +QPS+++ DEA+  LD+++++QILNLF++L++++G
Sbjct: 512 ALRHRYPHQFSGGQRQRIGIARALAVQPSMLVCDEAVAALDVSIQAQILNLFMDLRDQLG 571

Query: 201 VSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMI 250
           ++++++S  +GVI+H+ D+++VM+ G VVES    ++ A P HP TQ ++
Sbjct: 572 LAYLFISHDLGVIEHLCDRVVVMYLGRVVESAPVADLFARPAHPYTQALL 621



 Score =  154 bits (390), Expect = 4e-42
 Identities = 96/258 (37%), Positives = 143/258 (55%), Gaps = 15/258 (5%)

Query: 5   LEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVA 64
           LEV NL   F TR+G L       V  VSFTL  G+ +G +G++GSGKS     + G+V 
Sbjct: 14  LEVRNLQTRFHTRAGVLP-----VVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIMGLVD 68

Query: 65  PTG----GEIRVNGELLEHKDYSTRCKL----IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
           P G    G++   G  L       R +L    I MIFQDP  +LNP L++ T +   +K 
Sbjct: 69  PPGKVEGGQVLFQGRELTQLPAIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIEAVKA 128

Query: 117 NTSMTPEARMRRVKDTLQRVGLLP--EHAYFYPQMLATGQKQRVCLARALILQPSIIIAD 174
           +  ++ E   R  +DTL  +G+    E    YP  L+ G +QRV +A A++  P +IIAD
Sbjct: 129 HKRVSTEEARRHARDTLGLMGIPSPEERLRAYPHQLSGGMRQRVAIAIAMLHGPDLIIAD 188

Query: 175 EALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGET 234
           E    LD+ +++QIL+   +L  E G S +++S  + V+  + D+I VM+ G +VE G  
Sbjct: 189 EPTTALDVTIQAQILSEVQKLVRETGTSLIWISHDLSVVASLADEIAVMYAGRIVEHGTV 248

Query: 235 HEVLADPQHPITQRMIES 252
            +VL  PQHP T+ +I+S
Sbjct: 249 ADVLDHPQHPYTRGLIDS 266