Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  198 bits (503), Expect = 1e-55
 Identities = 98/256 (38%), Positives = 166/256 (64%), Gaps = 4/256 (1%)

Query: 1   MSALLEVTNLHKDF-VTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARML 59
           M+ +L    L + + V+R  F    +  A+  VSF LEAG+T+  +G++G GKSTLAR L
Sbjct: 1   MAVVLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 60  AGMVAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
             +  P+ G +++ G  ++    + R +L   ++M+FQ P  SLNPR +IG  L  PL  
Sbjct: 61  TLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLI 120

Query: 117 NTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEA 176
           NTS++   R  +V+  +++VGL PEH   YP M + GQ+QR+ LARA++LQP +++ADE 
Sbjct: 121 NTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP 180

Query: 177 LNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHE 236
            + LD+++++Q+LNLF++LQ+E   ++V++S ++ V++H+ D+++VM+ G   E G   +
Sbjct: 181 TSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKED 240

Query: 237 VLADPQHPITQRMIES 252
           + A P HP TQ ++ +
Sbjct: 241 IYAKPLHPYTQALLSA 256