Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  205 bits (522), Expect = 9e-58
 Identities = 101/253 (39%), Positives = 169/253 (66%), Gaps = 4/253 (1%)

Query: 4   LLEVTNLHKDFVTRSG-FLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           LL   +L K +  + G F  +++  A+  VSF LE G+T+  +G++G GKSTL R+L  +
Sbjct: 12  LLRAIDLKKHYPVKKGIFSPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMI 71

Query: 63  VAPTGGEIRVNGE-LLEHKDYSTRCKL--IRMIFQDPNTSLNPRLQIGTILEGPLKRNTS 119
             PTGGE+   G+ LL+H  ++ + +   I+++FQ+P  SLNPR ++G ILE PL  NTS
Sbjct: 72  ETPTGGELYYQGQDLLKHDPHAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTS 131

Query: 120 MTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNG 179
           ++   R  +    + +VGL  EH   YP M + GQ+QR+ +AR L+L P ++IADE ++ 
Sbjct: 132 LSKAQRREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSA 191

Query: 180 LDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLA 239
           LD+++R+Q+LNL ++LQ++MG+S+V++S  + V++HI D+++VM+ G  VE G   ++  
Sbjct: 192 LDVSVRAQVLNLMMDLQQDMGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFN 251

Query: 240 DPQHPITQRMIES 252
           +P+HP TQ ++ +
Sbjct: 252 NPRHPYTQALLSA 264