Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., predicted antimicrobial peptide transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  310 bits (794), Expect = 2e-89
 Identities = 151/259 (58%), Positives = 201/259 (77%)

Query: 1   MSALLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLA 60
           +  LLEV NL K F  R+G+ R+Q   AVKP+SFTL  GQT+  IG+NGSGKSTLA+MLA
Sbjct: 2   IETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLA 61

Query: 61  GMVAPTGGEIRVNGELLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSM 120
           GM+ PT GE+ ++   L   DYS R + IRMIFQDP+TSLNPR +I  IL+ PL+ NT +
Sbjct: 62  GMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDL 121

Query: 121 TPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGL 180
            PE R +++ +T++ VGLLP+H  +YP MLA GQKQR+ LARALIL+P +IIADEAL  L
Sbjct: 122 EPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADEALASL 181

Query: 181 DMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLAD 240
           DM+MRSQ++NL LELQE+ G+S++YV+QHIG++KHI+D+++VMH+G+VVE G T +VLA 
Sbjct: 182 DMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLAS 241

Query: 241 PQHPITQRMIESHFTKAPT 259
           P H +T+R+I  HF +A T
Sbjct: 242 PLHELTKRLIAGHFGEALT 260