Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF from Erwinia amylovora T8

 Score =  182 bits (461), Expect = 1e-50
 Identities = 104/257 (40%), Positives = 156/257 (60%), Gaps = 8/257 (3%)

Query: 4   LLEVTNLHKDFVTRSG----FLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARML 59
           LLE+ +L   F  + G    +   +   AV  VS  L  G+T+G +G++G GKSTLAR +
Sbjct: 10  LLEIADLKVHFDIKEGRQWFWQAPKTLKAVDGVSLRLYEGETLGIVGESGCGKSTLARAI 69

Query: 60  AGMVAPTGGEIRVNG-ELLEHKDYSTRCKL--IRMIFQDPNTSLNPRLQIGTILEGPLKR 116
            G+V  T G +   G +LL       R     I+MIFQDP  SLNPR+ IG I+  PL+ 
Sbjct: 70  IGLVKATDGRVAWLGRDLLGQSAEQWRAARSDIQMIFQDPLASLNPRMTIGDIIAEPLRT 129

Query: 117 -NTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADE 175
            +  M  E    RVK  + +VGLLP     YP   + GQ QR+ +ARALIL+P +II DE
Sbjct: 130 YHPDMAHEQVKARVKTMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDE 189

Query: 176 ALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETH 235
            ++ LD+++++Q++NL   LQ EMG+S ++++  + V+KHI+D+++VM+ G  VE G   
Sbjct: 190 PVSALDVSIQAQVVNLLQNLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHPVELGTYE 249

Query: 236 EVLADPQHPITQRMIES 252
           EV  +PQHP T+ ++ +
Sbjct: 250 EVYQNPQHPYTRALMSA 266