Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  180 bits (457), Expect = 6e-50
 Identities = 93/253 (36%), Positives = 160/253 (63%), Gaps = 7/253 (2%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQ--HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAG 61
           +L V NL   F  RSG   +Q    HAV+ VSF L  G+T+  +G++G GKST  R +  
Sbjct: 302 VLSVKNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMR 361

Query: 62  MVAPTGGEIRVNGELLEHKD---YSTRCKLIRMIFQDPNTSLNPRLQIGTILEGP-LKRN 117
           +V P+ G++ ++G  +   D        K ++MIFQDP +SLNPR+ +GT +  P +K  
Sbjct: 362 LVEPSSGDVSLDGYDVMRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHR 421

Query: 118 TSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEAL 177
              T +A+  +  D L++VGL  + A  YP   + GQ+QR+ +ARAL L P +I+ADE++
Sbjct: 422 LGSTKQAK-EKTADLLEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADESV 480

Query: 178 NGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEV 237
           + LD+++++Q+ NL L+LQ+ + ++F+++S  + V++ ++ ++ VM+ G++VE G    V
Sbjct: 481 SALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAV 540

Query: 238 LADPQHPITQRMI 250
             +PQHP T++++
Sbjct: 541 FDNPQHPYTKKLM 553



 Score =  147 bits (371), Expect = 5e-40
 Identities = 88/259 (33%), Positives = 143/259 (55%), Gaps = 15/259 (5%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           +L V NL   F+    +     +  V+ VSF +++G+T+  +G++GSGKS  +  L  ++
Sbjct: 6   VLSVRNLTTSFLVDGEW-----KSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLL 60

Query: 64  APTG----GEIRVNGE----LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLK 115
           AP      GE+ +NG     L E +    R   I MIFQ+P TSLNP   IG  +   L 
Sbjct: 61  APASSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLI 120

Query: 116 RNTSMTPEARMRRVKDTLQRVGLLPEHAYF--YPQMLATGQKQRVCLARALILQPSIIIA 173
           R+  ++ +         L++V +    + F  YP   + G +QRV +A AL  +P ++IA
Sbjct: 121 RHKGLSKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIA 180

Query: 174 DEALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGE 233
           DE    LD+ ++ QIL+L   LQEE G+S ++++  +GV+  I D+ IVM+ GD VE+G 
Sbjct: 181 DEPTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGA 240

Query: 234 THEVLADPQHPITQRMIES 252
           T ++    QHP T+ ++ +
Sbjct: 241 TEDIFRRGQHPYTRALLSA 259