Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  177 bits (448), Expect = 6e-49
 Identities = 105/253 (41%), Positives = 158/253 (62%), Gaps = 9/253 (3%)

Query: 4   LLEVTNLHKDFVTRSGFLRK-QIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           +LEV NL K++ +   F RK +   AV  VSF L  GQT+G +G++GSGKS+L R+L  +
Sbjct: 282 VLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKL 341

Query: 63  VAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILE-GPLKRNT 118
           + P GG IR +G  +   D S    L   I+MIFQDP  SLNPR  IG IL  GPL    
Sbjct: 342 LDPDGGAIRFDGRDIATMDESAFRALRPYIQMIFQDPFASLNPRHTIGKILTVGPLAHGM 401

Query: 119 SMTPEARMRRVKDTLQRVGLLPEHAYF-YPQMLATGQKQRVCLARALILQPSIIIADEAL 177
           ++  EAR + +   L+ VGL  E AY  +P   + GQ+QR+ +ARAL+  P +++ADEA+
Sbjct: 402 ALH-EARTKAL-GILKLVGL-DEQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAV 458

Query: 178 NGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEV 237
           + LD+++++Q+L L   +Q EM V+ ++++  + V   I D ++VMH+G VVE G   ++
Sbjct: 459 SALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKI 518

Query: 238 LADPQHPITQRMI 250
              P HP TQ+++
Sbjct: 519 FRAPTHPYTQKLV 531



 Score =  155 bits (393), Expect = 1e-42
 Identities = 89/235 (37%), Positives = 142/235 (60%), Gaps = 12/235 (5%)

Query: 27  HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAP----TGGEIRVNG-ELL---E 78
           HAVK +SF L AG+ +  IG++GSGKS  A  + G+++P    + GEI+  G ++L   E
Sbjct: 29  HAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPVITVSSGEIQFKGMDILAAKE 88

Query: 79  HKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGL 138
            K    R + + +IFQDP ++LNP + +G  +   L+ +   T E R  +V + L+ VGL
Sbjct: 89  EKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHGVGTRETRNAKVLELLEEVGL 148

Query: 139 LPEHAYF---YPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLEL 195
            P+       YP  L+ GQ+QRV +A AL L P ++IADE    LD+  ++QIL L  ++
Sbjct: 149 -PDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPTTALDVTTQAQILELIRKI 207

Query: 196 QEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMI 250
           Q+   +S ++++   GV+  I D+++VM +G +VE G   +VL +P HP TQR++
Sbjct: 208 QKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQVLINPVHPYTQRLV 262