Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  233 bits (595), Expect = 4e-66
 Identities = 132/330 (40%), Positives = 195/330 (59%), Gaps = 12/330 (3%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           M LL+I++L +        V  VD + +++++GE+  +VGESGSGKS+   A++G+ +  
Sbjct: 1   MSLLEIKNLNVRFGDKTA-VPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHP 59

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
             VTAD +     D+L+L+ R+RR+++ +D+AM+FQ+P T L+PS  VG Q+ E +    
Sbjct: 60  GIVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHL 119

Query: 121 -FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKL 179
              G+        +K+AI LL KV I      M +YP++L+ G  Q+V IAMAIA +PKL
Sbjct: 120 KMSGKQ------ARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKL 173

Query: 180 LIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVE 239
           LIADEPT  +D   Q+QI+ LL  + +  N  ++LI HDL  + + A R+ VMY GQ+VE
Sbjct: 174 LIADEPTTALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVE 233

Query: 240 SAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCP 299
             +  ++   P HPY+ ALLKA+P+ S       +L +LPG +P     P GC L PRCP
Sbjct: 234 VGQVPQLFDIPAHPYSEALLKAIPEHS---LGATRLATLPGIVPGRYDRPQGCLLSPRCP 290

Query: 300 YAQRQC-VEVPHSRWVKNHKFSCHFPLNME 328
           Y Q  C  + P      N    C +PLN E
Sbjct: 291 YVQENCRTQRPDLDPKTNSLARCFYPLNQE 320