Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., methionine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  216 bits (550), Expect = 6e-61
 Identities = 129/329 (39%), Positives = 176/329 (53%), Gaps = 13/329 (3%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKE- 59
           M LL +R L++  +     V  VDR+S  + EGEI GLVGESGSGK++  + ++ +    
Sbjct: 1   MSLLQVRDLSVIANNAGRDVTLVDRVSFDLAEGEILGLVGESGSGKTMACRGLMRLLPSP 60

Query: 60  NWRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFR 119
           N RV    +RLG  DLL L     R V    + MIFQ PS+ LDP   +G Q+ E I   
Sbjct: 61  NLRVQGGAVRLGGQDLLSLDDAGMRAVRGGQLGMIFQNPSSHLDPLMRIGEQIAEGIRLH 120

Query: 120 TFEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKL 179
               +   R      QAI +L +VGI D +  + +YP E + G  Q+ MIA+A+   PK+
Sbjct: 121 QGASKKDARL-----QAIEVLRQVGIPDPQARVDNYPQEFSGGMRQRAMIAVALGCNPKV 175

Query: 180 LIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVE 239
           LIADEPT  +D   Q+QILRLL  +      SI++I HDL  + Q  D I VMY G   E
Sbjct: 176 LIADEPTTALDVTVQAQILRLLLELRDQRGLSIIMITHDLGVVAQTCDAIAVMYAGCLCE 235

Query: 240 SAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCP 299
                 ++A+P+HPYTA L+   P  S        L+++PG  P L  LP GCR  PRCP
Sbjct: 236 HGSKYDVLAQPQHPYTAGLIDCQPAHSS---GHALLRTIPGQPPLLDALPAGCRFNPRCP 292

Query: 300 YAQRQCVEVPHSRWVKNHKFSCHFPLNME 328
                C EV      +  + +CH+PL  +
Sbjct: 293 QVGALCTEV----LPEGQRVACHYPLGAQ 317