Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  209 bits (532), Expect = 8e-59
 Identities = 113/310 (36%), Positives = 180/310 (58%), Gaps = 16/310 (5%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           M LL ++ L +E    +G ++A+DR+S  +  GEI G+VGESG+GKSL   AI+G+ +  
Sbjct: 1   MTLLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESP 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESI---- 116
            RV    +RL    +  L     R +  R +  IFQ+P T L+P   VGRQL+E+I    
Sbjct: 61  GRVAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHL 120

Query: 117 PFRTFEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAK 176
           P    E R         K+AI LL   GI   +  +  +P++ + G  Q+V+IA+A+AA+
Sbjct: 121 PVTDAEAR---------KRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAE 171

Query: 177 PKLLIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQ 236
           PKL++ADEPT  +D   Q+QI++LL R+ +    +++LI HD+  I +  DR+ VMY G+
Sbjct: 172 PKLIVADEPTTALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGR 231

Query: 237 SVESAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGP 296
             E     +++ +P HPYT+ L+ ++PD +     +++L  + G++P L  +P GC   P
Sbjct: 232 IAEIGPVHEVIHQPAHPYTSGLMASIPDMTS---DRERLNQIDGAMPRLNAIPTGCAYNP 288

Query: 297 RCPYAQRQCV 306
           RCP    +C+
Sbjct: 289 RCPRTFARCL 298