Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  249 bits (635), Expect = 9e-71
 Identities = 139/328 (42%), Positives = 203/328 (61%), Gaps = 10/328 (3%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           M LL++  L++         KAVDR+S ++ +GE+ G+VGESGSGKS+ + AI+G+    
Sbjct: 1   MALLNVDQLSVHFGDEGTPFKAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
            RV A+ +     DL +++ +ERR ++  +VAMIFQ+P T L+P   VG Q++E+I    
Sbjct: 61  GRVMAENLLFNGQDLKRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ 120

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
              +       R+++AI LL++VGI D    +  YP++L+ G  Q+VMIAMAIA +PKLL
Sbjct: 121 GGNK-----KTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLL 175

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPT  +D   Q+QI+ LL  + Q  N +++LI HDL  + + A +I VMY GQ VE+
Sbjct: 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
                I   P+HPYT ALL+A+P+F+     K +L SLPG +P     P GC L PRCPY
Sbjct: 236 GAAQDIFRAPRHPYTQALLRALPEFAQ---DKARLASLPGVVPGKYDRPTGCLLNPRCPY 292

Query: 301 AQRQC-VEVPHSRWVKNHKFS-CHFPLN 326
           A  +C  E P    + + + S CH+PL+
Sbjct: 293 ATDRCRAEEPALNQLDDGRQSKCHYPLD 320