Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., predicted antimicrobial peptide transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  471 bits (1213), Expect = e-138
 Identities = 217/328 (66%), Positives = 276/328 (84%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           MPLLDIR+LTIE  T    VKAVDR+S+T+ EGEIRGLVGESGSGKSL+AKAI G+ K+N
Sbjct: 1   MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
           WRVTADRMR  +IDLL+L+ RERR+++  +V+MIFQEP +CLDPSE VGRQL+++IP  T
Sbjct: 61  WRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT 120

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
           ++GRWW+RF WRK++AI LLH+VGIKDHKD M S+PYELT+GECQKVMIA+A+A +P+LL
Sbjct: 121 YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLL 180

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPTN ++P TQ+QI RLL+R+NQ +NT+ILLI HDL  ++QWAD+I V+YCGQ+VE+
Sbjct: 181 IADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVET 240

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
           A + ++V  P HPYT AL++A+PDF   +PHK +L +LPG+IP L+ LPIGCRLGPRCPY
Sbjct: 241 APSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPY 300

Query: 301 AQRQCVEVPHSRWVKNHKFSCHFPLNME 328
           AQR+C+  P     KNH ++CHFPLNME
Sbjct: 301 AQRECIVTPRLTGAKNHLYACHFPLNME 328