Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  187 bits (475), Expect = 3e-52
 Identities = 100/328 (30%), Positives = 184/328 (56%), Gaps = 8/328 (2%)

Query: 3   LLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWR 62
           +L+I+ L  E+ T +G +  +D ++L++  GE+ GLVGESGSGKS+   +I+G+  +  +
Sbjct: 4   MLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPVQ 63

Query: 63  VTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTFE 122
           +T  ++     DL   + +E R +    +AMIFQ+P + L+P   +  Q++E +      
Sbjct: 64  MTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHENV 123

Query: 123 GRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLIA 182
            +   R     ++A   L  VGI   ++ +S+YP++ + G  Q+V IA+A+   P ++IA
Sbjct: 124 SKQVAR-----ERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIA 178

Query: 183 DEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESAE 242
           DEPT  +D   Q+QIL ++ ++ +   T+++ + HDL+ +   A++++VMY G+ VE   
Sbjct: 179 DEPTTALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGL 238

Query: 243 TAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYAQ 302
           TA ++  P HPYT  L+ ++P  +      ++L+ + G+ P + ++P GC   PRC +A 
Sbjct: 239 TADLLRRPLHPYTNGLIASLPAHN---KRGERLRQISGTTPSVANMPKGCAFHPRCSFAT 295

Query: 303 RQCVEVPHSRWVKNHKFSCHFPLNMESP 330
             C+  P     +     C  P+   +P
Sbjct: 296 EICLNSPALEPTEGRLLRCFHPVMEGAP 323