Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  196 bits (498), Expect = 7e-55
 Identities = 126/326 (38%), Positives = 183/326 (56%), Gaps = 18/326 (5%)

Query: 3   LLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWR 62
           L+++  L++      G  + V  +S  ++ GE+  +VGESGSGKSL A  ++G+   + +
Sbjct: 4   LIEVHDLSVSF----GSAQPVKGVSFDVSPGEMLAIVGESGSGKSLTALGLIGLLPSHAK 59

Query: 63  VTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTFE 122
            T  R++L   DLL L+ R+ R +  RD+ MIFQEP T L+P   VG Q+IE +      
Sbjct: 60  -TGGRVQLEGRDLLPLSERQWRGIRGRDIGMIFQEPMTSLNPVLTVGEQIIEVL------ 112

Query: 123 GRWWERFTWR--KKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            R  E+   R  +K+AI LL  V I D    +  YP++L+ G  Q+VMIA+ +A  PKLL
Sbjct: 113 -RIHEKIDRRQARKRAIELLDLVNIPDAARRVDDYPHQLSGGMRQRVMIAIGVACNPKLL 171

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADE T  +D   Q+QIL+LL  + +  N +++LI HDL  + QWADR+ VMY G+ VE 
Sbjct: 172 IADEATTALDVTIQAQILQLLDNLRRDLNMAVILITHDLGIVAQWADRVMVMYAGRKVEE 231

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQ-KLQSLPGSIPPLQHLPIGCRLGPRCP 299
                + + P HPYT  LL A P   D   ++   L  +PGSI        GC   PRCP
Sbjct: 232 GLPEPVFSNPYHPYTRGLLAASPRAEDGQHYRDGPLIEIPGSIVSATG-ERGCAFRPRCP 290

Query: 300 YAQRQCVE-VPHSRWVKNHKF-SCHF 323
            A+  C + VP  R +   ++ +C F
Sbjct: 291 SARGFCGQFVPPLRPISEGRYAACPF 316