Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., putative D,D-dipeptide transport system permease protein DdpC from Xanthobacter sp. DMC5

 Score =  158 bits (400), Expect = 1e-43
 Identities = 89/262 (33%), Positives = 138/262 (52%), Gaps = 8/262 (3%)

Query: 31  FGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGTDDLGRDILSRL 90
           FG++ +L +       P+I PYDP    +   L P      +  ++ GTD+LGRDI SR+
Sbjct: 36  FGMFLVLVVCAT--FGPFIVPYDPLASDTAAALQPP-----SAAHWFGTDNLGRDIFSRV 88

Query: 91  IDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPSLLLAIIFV 150
           +  S   +  A+    +   VGG  G  +G   G     +  I DT+M+ P  +LA+  V
Sbjct: 89  VVASRLDMAIAIFSVALVFAVGGVAGIASGFFGGWTDRIIGRISDTIMAFPLFVLAMGIV 148

Query: 151 AFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYLLWHSIFPN 210
           A LG    NI++A  +   P ++R             YV AARL G +E+ +L  +I PN
Sbjct: 149 AALGNTVTNIVIATAIINFPLYVRVAKSEAAIRRNAGYVQAARLTGNSEWRILLTTILPN 208

Query: 211 ILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAPWTVTL-PG 269
           I+PI++ ++++ +  AIL+   L F+GLG + P+ EWG M+ +    I    W + L PG
Sbjct: 209 IMPIMMVQMSLTMGYAILNAAGLSFIGLGVRPPTPEWGIMVAEGSAYIVSGEWWIALFPG 268

Query: 270 LAIMFTVVVINLVGDGARQALN 291
           LA+MF V   NL+GDG R  ++
Sbjct: 269 LALMFAVFCFNLLGDGLRDIVD 290