Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  254 bits (649), Expect = 2e-72
 Identities = 123/280 (43%), Positives = 181/280 (64%), Gaps = 1/280 (0%)

Query: 13  PTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP-QMHSSVLLLPPSWEPEG 71
           P     FW +F AN  A+ GL +++ + LV + +PWIAP+ P + +S+V L PP+W+  G
Sbjct: 17  PGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGG 76

Query: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131
           +  Y LGTD +GRDILSRL+ G+  S+   V +  ++ +VG  +G +AG  +G+L   + 
Sbjct: 77  STSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIM 136

Query: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMA 191
            ++D V+++PSLLLAI+ VA LG G  N +LA+ + ++P ++R    AV  EV +DYV A
Sbjct: 137 RLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTA 196

Query: 192 ARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAML 251
           AR+ GA    L++  + PN    ++ + ++ +S AILD  ALGFLGLGAQ PS EWG ML
Sbjct: 197 ARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTML 256

Query: 252 GDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
            D+ E +  A W VT PGLAI+  V+  NL+GDG R AL+
Sbjct: 257 ADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALD 296