Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  178 bits (452), Expect = 1e-49
 Identities = 99/290 (34%), Positives = 158/290 (54%), Gaps = 4/290 (1%)

Query: 6   IYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPP 65
           + + + I T +  FWR FR  ++A+     +L + LV I + W+ PYD + +        
Sbjct: 17  VVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWLTPYDAENYFDY----D 72

Query: 66  SWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGL 125
           S     ++ ++ G D LGRDI SR++ G+  S+ A V    I  ++G  +G LAG  +G 
Sbjct: 73  SLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGTVLGLLAGYYEGW 132

Query: 126 LSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVE 185
               +  I D + + P +LLAI  VA LG+G  N+++A+ +  IP F R V        +
Sbjct: 133 WDRFIMRICDVLFAFPGILLAIAVVAVLGSGIANVIVAVAIFSIPAFARLVRGNTLVLKQ 192

Query: 186 KDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPST 245
           + ++ +AR  GA++  +L+  I P  +  IV   TM +  +I+   +L FLGLGAQ P+ 
Sbjct: 193 QTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTP 252

Query: 246 EWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           EWGAML ++   + IAP     P +AI  TV+  NL+GDG R AL+  ++
Sbjct: 253 EWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKIK 302