Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., peptide ABC transporter permease SapC from Erwinia amylovora T8

 Score =  322 bits (824), Expect = 8e-93
 Identities = 162/296 (54%), Positives = 218/296 (73%), Gaps = 1/296 (0%)

Query: 1   MLSDSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSS 59
           M SD+IY E   P+     WR F  +  AM G ++ L + L+T+    +APY   Q    
Sbjct: 1   MPSDNIYAERKPPSPLRHTWRLFYRDTTAMIGFYAFLALLLLTLFGAVLAPYGIDQQFLG 60

Query: 60  VLLLPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALA 119
             LLPPSW   G V +FLGTDDLGRD+LSRL+ G+  ++GAA+++TL +       G +A
Sbjct: 61  YQLLPPSWSRYGDVSFFLGTDDLGRDLLSRLLSGAAPTVGAAMVVTLGSACCALVPGVMA 120

Query: 120 GMTKGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVA 179
           G+T GL S+ LNH+LDT++SIPSLLLAII VAF G    + +LA+ LAL+PR +R++Y A
Sbjct: 121 GLTHGLRSAVLNHVLDTLLSIPSLLLAIIVVAFTGPKLEHAMLAVFLALLPRLVRAIYSA 180

Query: 180 VHNEVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLG 239
           VH+E+EK+YV+AARLDGA+ F +L ++IFPNI+ ++V E T ALS+AILDI ALGFL LG
Sbjct: 181 VHDELEKEYVVAARLDGASSFDILRYAIFPNIVALLVTEFTRALSLAILDIAALGFLDLG 240

Query: 240 AQSPSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           AQ PS EWGAMLGDS+EL+Y+APWTV LPG AIM +V+++NL+GDG R+A++AGV+
Sbjct: 241 AQLPSPEWGAMLGDSLELVYVAPWTVMLPGAAIMLSVLIVNLLGDGIRRAIDAGVK 296