Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., peptide ABC transporter permease SapC from Erwinia tracheiphila SCR3

 Score =  333 bits (855), Expect = 2e-96
 Identities = 167/296 (56%), Positives = 221/296 (74%), Gaps = 1/296 (0%)

Query: 1   MLSDSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSS 59
           M S +IY E+ +P+ F R WR F  +  AM G ++ + +  + +    +APY   Q    
Sbjct: 1   MPSVNIYAEKRLPSPFRRTWRLFYRDTAAMVGFYAFIALIFICLFGRMLAPYSLDQQFMG 60

Query: 60  VLLLPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALA 119
             LLPPSW   G V +FLGTDDLG D+LSRL+ G+  ++G+A+L+TL+A L    +G  A
Sbjct: 61  FQLLPPSWSRYGEVSFFLGTDDLGHDLLSRLLSGAAPTVGSAILVTLVAALFATVLGIFA 120

Query: 120 GMTKGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVA 179
           G+T+GL S+ +NHILDT++SIPSLLLAII VAFLG    + LLAI L++IPR +R+VY A
Sbjct: 121 GLTRGLRSAVMNHILDTLLSIPSLLLAIIVVAFLGPTLAHALLAIFLSIIPRLVRAVYSA 180

Query: 180 VHNEVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLG 239
           VH+E+EKDYV+AARLDGA+   +L H++FPNIL ++V+E T ALSIAILDI ALGFL LG
Sbjct: 181 VHDELEKDYVVAARLDGASSGNILRHAVFPNILALLVSEFTRALSIAILDIAALGFLDLG 240

Query: 240 AQSPSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           AQ PS EWGAMLGD++ELIY+APWTV LPG AIM +V+++NL+GDG R+A+ AGVE
Sbjct: 241 AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMLSVLIVNLLGDGIRRAIVAGVE 296