Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  176 bits (445), Expect = 7e-49
 Identities = 98/283 (34%), Positives = 160/283 (56%), Gaps = 11/283 (3%)

Query: 12  IPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEG 71
           +P    R  + F AN  A+ G   + F  LV +L+PWIAP+DP   + + +         
Sbjct: 13  LPRAQNRVLKKFLANKSAVIGAVMVGFFVLVALLAPWIAPFDPVKANFLAV-----RKAP 67

Query: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131
           +  Y+ GTD+LGRDILSR+I G+  S+ A  +  +IA ++G  +G +AG  + +    ++
Sbjct: 68  SAMYWFGTDELGRDILSRIIWGARTSLMAGCMSVVIAVVIGVPLGLVAGYFQKMWDGVIS 127

Query: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIP---RFIRSVYVAVHNEVEKDY 188
             ++ +++ P L++AI   AFLG    N ++AIGL+ +P   R  R   +A+ NE   +Y
Sbjct: 128 RFIEALLACPFLIMAIALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVIAIRNE---EY 184

Query: 189 VMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWG 248
           +  AR  G  + +++   + PN++  I+ + T+A++ AI+   +L FLGLG Q P+  WG
Sbjct: 185 IDGARAIGLPDRWIIIKYVLPNVMSPILVQATLAIASAIIAEASLSFLGLGQQPPNPSWG 244

Query: 249 AMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           +ML  +   +  APW    PG+AI   V   NL+GDG R AL+
Sbjct: 245 SMLNTAKGFLEQAPWMSVFPGVAIFLAVQGFNLLGDGLRDALD 287