Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  185 bits (469), Expect = 1e-51
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 6/287 (2%)

Query: 10  EHIPTQFERFWRSFRANNLAMF-GLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWE 68
           +H+ T +  FWR FR   +AM  GL+ LL IA V +++PW+AP+D + +     L     
Sbjct: 21  DHVRTPWSEFWRRFRRQPVAMTAGLFVLLLIA-VAVIAPWVAPFDAENYFDYDRLNDG-- 77

Query: 69  PEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSS 128
              ++ ++ G D LGRDI SR++ G+  S+ A V   LI   +G  +G +AG  +G    
Sbjct: 78  --PSMLHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVLIGAAIGTVLGLVAGYYEGWWDR 135

Query: 129 TLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDY 188
            +  I D + + P +LLAI  VA +G+G  N+++A+ +  IP F R V        ++ +
Sbjct: 136 IIMRICDVLFAFPGILLAIAVVAIMGSGMANVIIAVAVFSIPAFARLVRGNTLVLKQQTF 195

Query: 189 VMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWG 248
           + +AR  GA++  +L+  I P  +  IV   TM + ++I+   +L FLGLGAQ P+ EWG
Sbjct: 196 IESARSMGASDATILFSHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWG 255

Query: 249 AMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           AML ++   + IAP     P LAI  TV+  NL+GDG R AL+  ++
Sbjct: 256 AMLNEARADMVIAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPRIK 302