Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  166 bits (419), Expect = 8e-46
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 18/294 (6%)

Query: 8   QEEHIPTQFER--------FWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQ-MHS 58
           QE  +P +  R        FW   R + L + G   ++ +  + + SPWI P+DP  +  
Sbjct: 5   QETPVPVKTARQRINWAKLFWM-LRQSPLTIVGGVIMIAMLFLMVASPWIVPHDPNALDL 63

Query: 59  SVLLLPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGAL 118
           +  L  PS        ++ GTD++GRD+ SR++ GS  SI A + + +IA  +G  +G L
Sbjct: 64  TARLQAPS------AQHWFGTDEVGRDLFSRVLTGSQQSITAGLAVVVIAGGIGSLLGCL 117

Query: 119 AGMTKGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYV 178
           +G+  G   + +  ++D ++SIPSL+L +   A LG   FN +LAI +  IP ++R    
Sbjct: 118 SGVLGGRGDAIIMRVMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARG 177

Query: 179 AVHNEVEKDYVMAARLDGANEFYLL-WHSIFPNILPIIVAEITMALSIAILDITALGFLG 237
                 +  YV AAR  GA+ ++L+ WH I  N LP ++ + ++ +  AIL    LGF+G
Sbjct: 178 QTLVVRQFTYVQAARTFGASRWHLIRWH-ILRNALPPLIVQASLDIGSAILMAATLGFIG 236

Query: 238 LGAQSPSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           LGAQ P+ EWGAM+      +    W    PG AI+ T V  NL GDG R  L+
Sbjct: 237 LGAQQPTAEWGAMVAVGRNYVLDQWWYCAFPGAAILITAVGFNLFGDGIRDLLD 290