Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Putrescine export system permease protein SapC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  322 bits (825), Expect = 6e-93
 Identities = 162/293 (55%), Positives = 210/293 (71%), Gaps = 1/293 (0%)

Query: 4   DSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSSVLL 62
           DS+Y E+  P      WR F ++  AM GL+    +A++ I   W APY   Q      L
Sbjct: 4   DSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQL 63

Query: 63  LPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMT 122
           LPPSW   G V +FLGTDDLGRD+LSRL+ G+  ++G A ++TL AT+ G  +G  AG T
Sbjct: 64  LPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGAT 123

Query: 123 KGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHN 182
            GL S+ LNHILDT+++IPSLLLAII VAF G    + + A+ LAL+PR +RS+Y  VH+
Sbjct: 124 HGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHD 183

Query: 183 EVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQS 242
           E+EK+YV+AARLDGA+   +LW ++ PNI   +V EIT ALS+AILDI ALGFL LGAQ 
Sbjct: 184 ELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQL 243

Query: 243 PSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           PS EWGAMLGD++ELIY+APWTV LPG AIM +V+++NL+GDG R+A+ AGVE
Sbjct: 244 PSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE 296