Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  172 bits (436), Expect = 8e-48
 Identities = 99/270 (36%), Positives = 154/270 (57%), Gaps = 9/270 (3%)

Query: 24  RANNLAMFGLWSLLFIALVTILSPWIAPYDPQ-MHSSVLLLPPSWEPEGTVDYFLGTDDL 82
           + + L + G   ++ + L+ I SPW+A +DP  +  +  LLPPS        ++ GTD++
Sbjct: 28  KGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPS------AAHWFGTDEV 81

Query: 83  GRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPS 142
           GRD+ SR++ GS  SI A +++  IA ++G  +G L+G+  G   + +  I+D ++SIPS
Sbjct: 82  GRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPS 141

Query: 143 LLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYL 202
           L+L +   A LG   FN +LAI +  IP ++R          +  YV AA+  GA+ ++L
Sbjct: 142 LVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHL 201

Query: 203 L-WHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIA 261
           + WH I  N LP ++ + ++ +  AIL    LGF+GLGAQ PS EWGAM+ +    +   
Sbjct: 202 INWH-ILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQ 260

Query: 262 PWTVTLPGLAIMFTVVVINLVGDGARQALN 291
            W    PG AI+ T V  NL GDG R  L+
Sbjct: 261 WWYCAFPGAAILLTAVGFNLFGDGIRDLLD 290