Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  167 bits (424), Expect = 2e-46
 Identities = 99/260 (38%), Positives = 149/260 (57%), Gaps = 12/260 (4%)

Query: 36  LLFIALVTILSP-WIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGTDDLGRDILSRLIDGS 94
           +L +AL+T+ +   +AP DP+   ++ +L     P     ++ GTD LGRDILSR++ G+
Sbjct: 20  ILLLALITVCAGVHLAPADPE---AISILARYKAPSAM--HWFGTDQLGRDILSRVLVGA 74

Query: 95  LFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPSLLLAIIFVAFLG 154
             +I  ++L T +A + G  IG  +    G +   +   +D VMSIPSLL A++ V+ LG
Sbjct: 75  RTTILYSLLATSLAMVAGSVIGTASAYLGGRMDEGIMRTMDAVMSIPSLLFALLIVSTLG 134

Query: 155 AGEFNILLAIGLALIP---RFIRSVYVAVHNEVEKDYVMAARLDGANEFYLLWHSIFPNI 211
               N +LAI +A +P   R  RSV +A     ++DYV AA   G +  Y++   + PNI
Sbjct: 135 QSSLNAVLAITIAFVPGMVRIARSVALAAR---QQDYVNAAIARGESSGYIILREMLPNI 191

Query: 212 LPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAPWTVTLPGLA 271
           +  I+ E T+ +S AI+    L FLGLGAQ P  EWG M+ ++    + APW + +PGLA
Sbjct: 192 VAPIIVESTIRVSFAIMLFATLSFLGLGAQPPQPEWGLMVSEARAYFFNAPWMMLIPGLA 251

Query: 272 IMFTVVVINLVGDGARQALN 291
           I    +  NL+GDG R  LN
Sbjct: 252 IAIVAIGFNLLGDGLRDVLN 271