Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  173 bits (439), Expect = 4e-48
 Identities = 99/270 (36%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 26  NNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGTDDLGRD 85
           N L   G   +L + L+ I SPWIA +DP M      L        +  ++ GTD+ GRD
Sbjct: 37  NPLTAIGSAIVLVLMLMAIFSPWIATHDPLMQDLANTLQAP-----SASHWFGTDEFGRD 91

Query: 86  ILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPSLLL 145
           + SRL+ GS  ++    L+++    +G  +G +AG   G++ + L  I D  +S PSL+L
Sbjct: 92  VFSRLVYGSRITLYIVALVSITVGPIGLLLGVVAGYYGGVVDTILMRITDIFISFPSLVL 151

Query: 146 AIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYLLWH 205
           A+ FVA LG G  ++++AI L   P   R       +  + D+V A +L GA+   +L H
Sbjct: 152 ALAFVAALGPGLEHVVIAITLTAWPPIARLARAETLSLRQADFVSAVKLQGASSLRILLH 211

Query: 206 SIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAPWTV 265
            I P  LP ++  ITM ++  IL    LGFLGLGAQ P  EWGAM+      +    W V
Sbjct: 212 HIVPLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQPPDPEWGAMISAGRRYMMECWWLV 271

Query: 266 TLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           T+PGLAI+   +  N +GDG R  L+   E
Sbjct: 272 TIPGLAILINSLAFNFLGDGLRDILDPRTE 301