Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., peptide ABC transporter permease SapC from Dickeya dadantii 3937

 Score =  323 bits (827), Expect = 4e-93
 Identities = 158/296 (53%), Positives = 219/296 (73%), Gaps = 1/296 (0%)

Query: 1   MLSDSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSS 59
           M SD+IY E+ +P+++   W  FR + +AM G +  L +  + +    +APY   Q    
Sbjct: 1   MHSDNIYGEKELPSRWRDTWNVFRQDRMAMVGFYGFLLLLGLCLFGDTLAPYALDQQFLG 60

Query: 60  VLLLPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALA 119
             LLPPSW   G V +FLGTDDLGRD+LSRL+ G+  + G+A+L+TL A L G  IG LA
Sbjct: 61  YQLLPPSWSRYGEVSFFLGTDDLGRDLLSRLLSGTAPTFGSALLVTLAAMLAGILIGLLA 120

Query: 120 GMTKGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVA 179
           G+T GL S+ LNHILD ++SIPSLLLA++ +AF+G    + +LA+ +AL+PR +R++Y A
Sbjct: 121 GVTHGLRSAILNHILDPLLSIPSLLLAMVVIAFIGPQLTHAMLAVWMALLPRMVRTIYTA 180

Query: 180 VHNEVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLG 239
           VH+E+EK+YV AARLDGA+  Y++W+++ PNILP++V+E+T ALSIAILDI ALGFL LG
Sbjct: 181 VHDELEKEYVTAARLDGASTRYIIWYAVVPNILPLLVSEVTRALSIAILDIAALGFLNLG 240

Query: 240 AQSPSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
           AQ P+TEWG +LG+S+EL+Y APWTV LPG AI  +V+++NL+GDG R+AL A  E
Sbjct: 241 AQLPTTEWGVLLGNSLELVYAAPWTVMLPGAAITLSVLIVNLLGDGIRRALLAQTE 296