Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  172 bits (435), Expect = 1e-47
 Identities = 99/272 (36%), Positives = 147/272 (54%), Gaps = 9/272 (3%)

Query: 26  NNLAMFGLWSLLFIALVTILSPWIAPYDP--QMHSSVLLLPPSWEPEGTVDYFLGTDDLG 83
           N L   G   +L + L+ + SPWIA +DP  Q  ++ L  P       +  ++ GTD+ G
Sbjct: 37  NPLTAIGAAIVLVLMLMAVFSPWIATHDPLAQDLANTLQAP-------SASHWFGTDEFG 89

Query: 84  RDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPSL 143
           RD+ SRL+ GS  ++    L+++    +G  +G +AG   G++ + L  I D  +S PSL
Sbjct: 90  RDVFSRLVYGSRITLYIVALVSITVGPIGLLLGVVAGYYGGVVDTILMRITDIFISFPSL 149

Query: 144 LLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYLL 203
           +LA+ FVA LG G  ++++AI L   P   R       +  + D+V A +L GA+   +L
Sbjct: 150 VLALAFVAALGPGLEHVVIAITLTAWPPIARLARAETLSLRQADFVSAVKLQGASSLRIL 209

Query: 204 WHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAPW 263
            H I P  LP ++  ITM ++  IL    LGFLGLGAQ P  EWGAM+      +    W
Sbjct: 210 LHHIVPLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQPPDPEWGAMISAGRRYMMECWW 269

Query: 264 TVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295
            VT+PGLAI+   +  N +GDG R  L+   E
Sbjct: 270 LVTIPGLAILINSLAFNFLGDGLRDILDPRTE 301