Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  173 bits (439), Expect = 3e-48
 Identities = 100/269 (37%), Positives = 153/269 (56%), Gaps = 7/269 (2%)

Query: 24  RANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHS-SVLLLPPSWEPEGTVDYFLGTDDL 82
           + N  A+ GL  +LF A++ I +P +   DP   S S +   PS        ++LGTDDL
Sbjct: 2   KRNKSALAGLIIVLFFAVLAIAAPILPIADPVATSWSAIRKAPS------AAHWLGTDDL 55

Query: 83  GRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPS 142
           GRDILSR+I G+  S+ A V+  +IA ++G   G +AG   G +   ++ I + ++++P 
Sbjct: 56  GRDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRITEALLAMPF 115

Query: 143 LLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYL 202
           L++AI   AFLG    N ++AIGL+ +P F+R     V     +DYV  AR  G N   +
Sbjct: 116 LIMAIALAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKMEDYVEGARSIGLNHIDI 175

Query: 203 LWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAP 262
           +   I PN+   I+ + T+ ++ AI+   +L FLGLG Q+P+  WG+ML  +   +  AP
Sbjct: 176 MTRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWGSMLNTAKNFLSQAP 235

Query: 263 WTVTLPGLAIMFTVVVINLVGDGARQALN 291
           W    PG+AI   V+  NL+GDG R AL+
Sbjct: 236 WMTLWPGIAIFLVVIGFNLLGDGLRDALD 264