Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  172 bits (435), Expect = 1e-47
 Identities = 107/286 (37%), Positives = 152/286 (53%), Gaps = 17/286 (5%)

Query: 12  IPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVL---LLPPSWE 68
           + T   R  R      L MFG   L  + LV + +P IAP+DP   S VL   L PPSW 
Sbjct: 19  LSTTTGRTLRKLADEPLGMFGFAILAILVLVAVFAPLIAPFDPA--SQVLENALQPPSWA 76

Query: 69  PEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSS 128
                 +  GTD+ GRDI SRL+ G+  +I   + +++I   +G  IG +AG   G   +
Sbjct: 77  ------HLAGTDEFGRDIFSRLVYGTRITIQTVLSVSIIVGPIGLAIGVMAGFFGGRTDA 130

Query: 129 TLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIP---RFIRSVYVAVHNEVE 185
            L    D V+S PSL+LA+ F A +GAG    ++AI L   P   R  R+  + V N   
Sbjct: 131 ILMRATDIVLSFPSLVLALAFAAAMGAGLGTAIIAISLTAWPPIARLARAEALVVRNT-- 188

Query: 186 KDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPST 245
            DYV AARL GA+   +L+  I P  +P ++  +T+ ++  IL   +LGFLGLGAQ P  
Sbjct: 189 -DYVAAARLYGASPLRILFLYIAPMCIPSVIVRLTLNMAGIILTAASLGFLGLGAQPPLP 247

Query: 246 EWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           EWGAM+    + +    W   +PG+AI+ T +  N+ GD  R  L+
Sbjct: 248 EWGAMISSGRKFMLDYWWVAVMPGIAILLTSLAFNIAGDTLRDLLD 293