Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  178 bits (451), Expect = 2e-49
 Identities = 100/274 (36%), Positives = 148/274 (54%), Gaps = 7/274 (2%)

Query: 20  WRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHS--SVLLLPPSWEPEGTVDYFL 77
           WR F  N LA+ GL  ++ +  V + +  +AP++P      +  LLPP     GT  Y L
Sbjct: 36  WRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPP-----GTAGYLL 90

Query: 78  GTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTV 137
           GTDD GRDILSRLI GS  ++   +L+ +IA  +G  +G ++G   G + + L  I D  
Sbjct: 91  GTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIF 150

Query: 138 MSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGA 197
           ++ P L+LA+  VA LG G  N +LAI +   P + R            D++ A +L GA
Sbjct: 151 LAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGA 210

Query: 198 NEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVEL 257
           + F ++   + P  L  ++  +T+ ++  IL    LGFLGLGAQ P  EWGAM+      
Sbjct: 211 SPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRF 270

Query: 258 IYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           I    W   +PG+AI+   +  NL+GDG R AL+
Sbjct: 271 ILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALD 304