Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  233 bits (594), Expect = 4e-66
 Identities = 118/274 (43%), Positives = 175/274 (63%), Gaps = 1/274 (0%)

Query: 19  FWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP-QMHSSVLLLPPSWEPEGTVDYFL 77
           FW  FR N  A+ GL   + + L+ + +  IAP+DP Q +   LL+PP W+  G   + L
Sbjct: 25  FWFYFRQNRGAVIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLL 84

Query: 78  GTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTV 137
           GTD +GRD+LSRLI G+ +S+   V++  IA + G  IG +AG   G + + +  ++D +
Sbjct: 85  GTDAVGRDMLSRLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVI 144

Query: 138 MSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGA 197
           ++ PSLLLA++ VA LG G  N ++AI +   P F R    AV +E+ ++YV AAR+ GA
Sbjct: 145 LAFPSLLLALVLVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGA 204

Query: 198 NEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVEL 257
               L++ +I PN L  ++ + T++ S A+LD  ALGFLG+GAQ P++EWG ML ++ E 
Sbjct: 205 GNLRLMFKTILPNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREF 264

Query: 258 IYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           I  A W VTLPGL I+ +V+ INL+GDG R AL+
Sbjct: 265 ILRAWWVVTLPGLTILISVLAINLMGDGLRDALD 298