Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

 Score =  179 bits (453), Expect = 9e-50
 Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 18  RFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP--QMHSSVLLLPPSWEPEGTVDY 75
           R W + ++N LA+ GL  ++    +++L+P IAPYDP  Q   + L  P         ++
Sbjct: 28  RIWLNLKSNPLAVIGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFP-------NAEH 80

Query: 76  FLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILD 135
           + GTD+LGRDILSR++ G   ++G  + + ++   +G  IG +AG   G++ + L  + D
Sbjct: 81  WFGTDELGRDILSRILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTD 140

Query: 136 TVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLD 195
             ++ P L+LA+ FVA L  G  + +LAI L   P + R            D+V A RL 
Sbjct: 141 VFLAFPRLILALAFVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLT 200

Query: 196 GANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSV 255
           GA+ + ++   I P  +P ++  IT+ +S  I+   +LGFLG+GAQ PS EWGAM+  + 
Sbjct: 201 GASAWRIIARHIAPLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAK 260

Query: 256 ELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
             I+   W  T+PG+AI    +  N +GDG R  L+
Sbjct: 261 RFIFEQWWVATIPGIAIFLVSLAFNFLGDGLRDVLD 296