Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

 Score =  199 bits (507), Expect = 6e-56
 Identities = 95/250 (38%), Positives = 157/250 (62%), Gaps = 3/250 (1%)

Query: 65  ILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYSAPIFW 124
           + +E L +FPAT+EL   A + +LL+G+P G +A +R+    D  +   S++GYS PIFW
Sbjct: 88  VANEFLALFPATVELGVCAILFALLLGLPAGIIAAVRRNSIFDHGVMATSLTGYSMPIFW 147

Query: 125 LALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALIDAFLSQSPYRSQALQSVIEHLTL 184
             L++I+ FS+     PV+GR  + Y ++  TGF L+DA  +       A  S + HL L
Sbjct: 148 WGLLLILFFSVQLGWTPVSGRIAVQYFVEPRTGFLLVDALRAGEV---DAFWSALHHLVL 204

Query: 185 PCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPPMIPKF 244
           P +VL   P   +    R+++ EV+ ++YIR A+ KGLS  ++V  H LRNA+ P++   
Sbjct: 205 PAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAKGLSRLRVVGLHALRNALIPVVTVI 264

Query: 245 GVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANILSDLI 304
           G+Q+  + T AI+TE+IF+WPG+G+WL++A+  RD+  +Q G++++G +V+  N+L D+ 
Sbjct: 265 GLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDYPVLQGGMLLLGGIVMLVNLLVDVT 324

Query: 305 GAAANPLVRK 314
               NP +R+
Sbjct: 325 YGIINPRIRR 334