Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  147 bits (370), Expect = 4e-40
 Identities = 90/337 (26%), Positives = 168/337 (49%), Gaps = 38/337 (11%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIG--------------------- 39
           MF + +R+    +I ++ +  + + L ++       L+G                     
Sbjct: 1   MFAFILRRLAQAVIVMVSVAFIAFMLFQYVGDPVVFLLGQDATPDQVRELRSELGLDRPF 60

Query: 40  FWQGWSSYLVQLMEFNFGLN-KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLA 98
           F Q W  +L   ++  FGL+ + G  +   +   FPAT+EL  +A +L+L+VGIP+G  A
Sbjct: 61  FVQFWH-FLANAVQGEFGLSLRQGAKVSRLIAERFPATLELSMVAAVLALVVGIPMGVYA 119

Query: 99  GMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGF 158
            +R+G ++  +   +S+ G S P F + +++I+ F++    FP  GR D+       TG 
Sbjct: 120 ALRRGTFMSQVFMTVSLLGVSLPTFLIGILLILLFAVTLGWFPSFGRGDVTQLGWWSTGL 179

Query: 159 ALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAK 218
                +                H+TLP + LA+   T ++  +RA + EV+  +YI+ A+
Sbjct: 180 LTPKGW---------------HHITLPAITLAIFQLTLIMRLVRAEMLEVLRTDYIKFAR 224

Query: 219 IKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANR 278
            +GL+N  +   H L+N + P++   G+QL  ++  AIITE++F WPG+G   + A+   
Sbjct: 225 ARGLTNRAVHFGHALKNTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFA 284

Query: 279 DFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVRKE 315
           D   + A + ++  + +  N++ DL+  A +P +R E
Sbjct: 285 DIPVMAAYLCLIALIFVVINLIVDLLYFAVDPRLRVE 321