Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., ABC transporter permease from Erwinia tracheiphila SCR3

 Score =  151 bits (382), Expect = 2e-41
 Identities = 88/270 (32%), Positives = 148/270 (54%), Gaps = 14/270 (5%)

Query: 40  FWQGWSSYLVQLMEFNFGLNK-NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLA 98
           FW     YL  L + + G+++    P+  +LL  FPAT EL T A       GI +  LA
Sbjct: 81  FWY----YLSHLAQGDLGISRLTNQPVASDLLRTFPATFELSTCAMFFGASFGILLALLA 136

Query: 99  GMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFS--LHFPVFPVAGRYD--LLYQIDH 154
             + G  +D++  FIS+ GYS P+FWL L+ ++ F   LH+   P  GR D   +Y ++ 
Sbjct: 137 AWKPGSLVDSLARFISLLGYSVPVFWLGLLGLLLFYAVLHWSAGP--GRLDDIWIYTLEP 194

Query: 155 VTGFALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYI 214
            TG  L+D++LS  P   +  ++ I HL LP +VL L     +   +RA++ E  ++ Y+
Sbjct: 195 KTGLVLVDSWLSGDP---EMFRNAIAHLWLPVVVLGLLSMAAITRLLRAALLEESSKEYV 251

Query: 215 RAAKIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDA 274
             A+ KG    +I+  HVL N    +I    +  +S+L  +++TE++F WPG+GR++ +A
Sbjct: 252 TLARAKGAGRGRILLLHVLPNVRGTLITVLALSYTSLLEGSVLTETVFAWPGVGRYMTNA 311

Query: 275 LANRDFMSIQAGVIVVGTLVLTANILSDLI 304
           L   D  +I    +++G+  ++ N L+D +
Sbjct: 312 LFAADTPAILGSTLLIGSCFISLNALADAL 341