Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., putrescine ABC transporter permease SapB from Erwinia tracheiphila SCR3

 Score =  331 bits (848), Expect = 2e-95
 Identities = 158/318 (49%), Positives = 229/318 (72%), Gaps = 1/318 (0%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIGFWQGWSSYLVQLMEFNFGLNK 60
           M +Y +R+  L+++T+L+LT+VG+SL  F PH+P   +        +   L + +FG++ 
Sbjct: 1   MVIYALRRLVLWLVTILMLTLVGFSLCFFTPHAPLQGVSAVDAMLFWYKGLFQLDFGVST 60

Query: 61  -NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYS 119
            NG PI  ++  VFPAT+ELC IAF L++L GIP+G  AG+   +W D +IS  ++ G+S
Sbjct: 61  INGEPIGAQIREVFPATLELCIIAFTLAMLAGIPLGIAAGVMHNRWPDRLISGFALLGFS 120

Query: 120 APIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALIDAFLSQSPYRSQALQSVI 179
            P+FWLAL++ + FSL     PV+GR+DLLY + ++TGF+LIDA+LS SP+R + L S +
Sbjct: 121 MPVFWLALLLTLFFSLTLGWLPVSGRFDLLYSVQNMTGFSLIDAWLSHSPWRYEMLISAL 180

Query: 180 EHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPP 239
            HL LP + LALAPTT+V+  +R S  EVM QNYI+AA  +GLS   I+ +HV  NA+PP
Sbjct: 181 RHLILPVITLALAPTTEVVRLLRISTREVMEQNYIKAAATRGLSLPVIIRRHVAHNALPP 240

Query: 240 MIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANI 299
           +IP+ G+Q S+MLTLAIITE +F+WPG+GRWL+DA+  +D+ +I AGV+VVG LV++ N+
Sbjct: 241 VIPRLGLQFSTMLTLAIITEVVFSWPGLGRWLVDAIRQQDYAAISAGVMVVGGLVISVNV 300

Query: 300 LSDLIGAAANPLVRKEWY 317
           L+D++GA  NPL  KEWY
Sbjct: 301 LADILGAMTNPLKHKEWY 318