Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  170 bits (431), Expect = 4e-47
 Identities = 87/254 (34%), Positives = 148/254 (58%), Gaps = 4/254 (1%)

Query: 60  KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYS 119
           + G P+  +L   FPAT+EL   + +L+L++G+P+G L+ + + +WLD ++  ++M+G S
Sbjct: 84  RTGRPVAEDLKAFFPATLELAFCSLLLALVIGVPLGILSAVYRNRWLDHLVRLMAMTGIS 143

Query: 120 APIFWLALMMIMAFSLHFPVFPVAGRYD-LLYQIDHVTGFALIDAFLSQSPYRSQALQSV 178
            P FWL L +I+ F  H  + P  GR D  L    HVTGF L+DA L  +    +   + 
Sbjct: 144 TPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGN---GEVFFNA 200

Query: 179 IEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIP 238
           ++HL LP L LA      V  Q+R+++ E ++++YIR A+  GL    IV ++ L NA+ 
Sbjct: 201 LQHLILPSLTLAFVHLGIVARQVRSAMLEQLSEDYIRTARASGLPGGYIVLRYALPNAMI 260

Query: 239 PMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTAN 298
           P I   G+ L  +L  A++TE++F WPG+G W++ ++   DF ++    +VV    +  N
Sbjct: 261 PSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSLAYVLVN 320

Query: 299 ILSDLIGAAANPLV 312
           ++ DL+    +P +
Sbjct: 321 LVVDLLYLWIDPRI 334