Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., peptide ABC transporter permease SapB from Dickeya dianthicola ME23

 Score =  341 bits (874), Expect = 2e-98
 Identities = 164/321 (51%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIGFWQGWSSYLVQLMEFNFGLNK 60
           M ++T+R+  L ++TL +L+++G+SL  + PH+P         +  Y   L++ +FG++ 
Sbjct: 1   MIIFTLRRLLLLLVTLFLLSLIGFSLMYYTPHAPLNGAALLDAYRFYFSSLLQGDFGVSS 60

Query: 61  -NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYS 119
            NG PI  +L  V PATIELC +AF LSLLVGIP+G   G+ Q K  D IIS +++ G+S
Sbjct: 61  TNGQPISEQLRDVLPATIELCLLAFSLSLLVGIPLGITTGVLQHKAADRIISALALLGFS 120

Query: 120 APIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALIDAFLSQSPYRSQALQSVI 179
            P+FWLAL+M + FSLH    PV+GR+DLLY +   TGFALIDA+LS SPYR + + S I
Sbjct: 121 LPVFWLALLMTLFFSLHLGWLPVSGRFDLLYPVPQATGFALIDAWLSDSPYREEMIASAI 180

Query: 180 EHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPP 239
           +HL LP LVL++ PTT+V+  MR S  ++  QNYI+AA I+GL    ++ +H+L NA+PP
Sbjct: 181 QHLILPVLVLSVGPTTEVVRLMRISTTDIGTQNYIKAAIIRGLPRSTVIRRHLLHNALPP 240

Query: 240 MIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANI 299
           +IP+ G+Q S+MLTL +ITE +FNWPGIGRWL++A+  +DF +I AGV+VVG LV+T N+
Sbjct: 241 IIPQLGLQFSTMLTLEMITEVVFNWPGIGRWLVNAIRQQDFAAISAGVMVVGALVITINV 300

Query: 300 LSDLIGAAANPLVRKEWYVKR 320
           LSD+ GA ANPL  KEWY  R
Sbjct: 301 LSDIWGAMANPLKHKEWYALR 321