Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  144 bits (362), Expect = 4e-39
 Identities = 85/278 (30%), Positives = 145/278 (52%), Gaps = 11/278 (3%)

Query: 41  WQGWSSYLVQLMEFNFGLNKNGV-PILHELLVVFPATIELCTIAFILSLLVGIPIGTLAG 99
           W  +  YL  L++ +FG+++    P+L +LL  FPAT EL T A ++    GI +  L+ 
Sbjct: 75  WLQFWHYLSALLQGDFGVSRTTAQPVLQDLLRTFPATFELATSAIVIGFGGGITLALLSA 134

Query: 100 MRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFS--LHFPVFPVAGRYDLLYQI--DHV 155
           ++ G  LD ++  +++ GYS P+FW+ L+ ++ F   LH+   P  GR+D +YQ   +  
Sbjct: 135 LKPGGVLDYLVRGVTLLGYSVPVFWIGLLSLLLFYAVLHWSAGP--GRFDDIYQYSAELP 192

Query: 156 TGFALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIR 215
           TGF L+  + S       AL     HL LP  VL       +   +R ++ E   + Y+ 
Sbjct: 193 TGFVLLGGWNSNLAMFRNALA----HLWLPASVLGFVSMASIARMLRTAILEECGKEYVT 248

Query: 216 AAKIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDAL 275
            A+  G S  +I+  H+L N    M+    +  +S+L  AI+ E++F+WPG+GR+L  AL
Sbjct: 249 LARAMGASPLRILFFHILPNIQTVMVTVLMLSYASLLEGAILVETVFSWPGVGRYLTTAL 308

Query: 276 ANRDFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
              D  ++    +++G   +  N L+D +    +P  R
Sbjct: 309 FAADIPAVLGATLLIGVCFILLNALADALIFLLDPRTR 346