Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  217 bits (553), Expect = 3e-61
 Identities = 115/336 (34%), Positives = 196/336 (58%), Gaps = 26/336 (7%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTL-IG-------------------- 39
           M  + + + +L I T L +T + + L R  P  P  + +G                    
Sbjct: 1   MLRFILTRVSLVIPTFLGITFLTFILIRLVPGDPIEVRVGERGIAPDRLAALRHELGLDQ 60

Query: 40  -FWQGWSSYLVQLMEFNFGLNK-NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTL 97
             WQ +  Y+  ++  +FGL+      +L E + +FPAT+EL   A + + LVG+P G L
Sbjct: 61  SLWQQFLDYVGNVLSGDFGLSLVTHNSVLSEFVTLFPATLELALCAMLFATLVGLPAGIL 120

Query: 98  AGMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTG 157
           A +++G   D  +   S++GYS PIFW  L++I+ FS+     PV+GR DL+Y ++ VTG
Sbjct: 121 AAVKRGSLFDHGVMGASLTGYSMPIFWWGLLLILFFSVALGWTPVSGRLDLVYYVEPVTG 180

Query: 158 FALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAA 217
           F LID  ++      +A +S + HL LP +VL   P   V    R+++ EV+ ++YIR A
Sbjct: 181 FMLIDTLMAGD---YEAFRSALSHLILPTIVLGTVPLAVVARMTRSAMLEVLGEDYIRTA 237

Query: 218 KIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALAN 277
           + KGL++ +++  H LRNA+ P++   G+Q+ ++L  AI+TE+IF+WPG+G+WL++++  
Sbjct: 238 RAKGLASGRVIGMHALRNALIPVVTVIGLQVGTLLGGAILTETIFSWPGVGKWLIESINR 297

Query: 278 RDFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
           RD+ ++Q GV+++ T V+  N+L D++    NP +R
Sbjct: 298 RDYPALQGGVLLIATSVILVNLLVDVLYGVLNPRIR 333