Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., peptide ABC transporter substrate-binding protein SapA from Pectobacterium carotovorum WPP14

 Score =  442 bits (1136), Expect = e-128
 Identities = 227/509 (44%), Positives = 316/509 (62%), Gaps = 1/509 (0%)

Query: 29  IRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVN 88
           IR SGFVYC      TFNPQ+A + +T D L  Q+Y+ LL +DP T+  +  LA  W V 
Sbjct: 35  IRQSGFVYCVNDVLNTFNPQMARSGVTIDTLAAQLYDRLLDVDPYTYRLMPELAQRWEVL 94

Query: 89  STGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKG 148
             G  Y F LR DV FQ T WFSPTR +NADDV+FSF+R++D  +PYH V   +YP+F  
Sbjct: 95  DNGSTYRFYLRRDVPFQHTAWFSPTRNMNADDVIFSFQRMLDEKHPYHDVNGGEYPYFDS 154

Query: 149 IDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDN 208
           + F + +  +  L + +++  L+ PD SFL ++AT +A ILS EYA +L  +D+KE LD 
Sbjct: 155 LQFADSVQSIRKLGEYSIEIRLNSPDASFLWHLATHYAPILSAEYAQRLTKEDKKELLDR 214

Query: 209 LPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVL 268
            P+GTGP+ L EY     IRL R+  YW G  ++ QVV D+   GTG L+KLL  ECDVL
Sbjct: 215 EPVGTGPYLLNEYRNGQYIRLTRNSDYWRGLPRMRQVVVDLGSGGTGRLSKLLTGECDVL 274

Query: 269 NAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDS 328
             P +SQL  +  +P + L   P MNVA++A N + P L+D RVR+A+  AIN   ++ S
Sbjct: 275 AYPAASQLTILRNDPRLRLSLRPGMNVAYLAFNVRKPPLDDRRVREAIALAINNDRLMQS 334

Query: 329 VYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPKAY 388
           +YYGT   A +ILP  SWAY  ++    Y+   A+ +L+E G  T L L + VP   ++Y
Sbjct: 335 IYYGTAETAASILPRASWAYDNESQITEYNPQKARQILQELGL-TNLNLRLWVPSASQSY 393

Query: 389 NPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLR 448
           NPSP KTAELIQA+LA IGVT+ ++  +   ++   +  + DL L+GW  D+ DPD+F R
Sbjct: 394 NPSPLKTAELIQADLAQIGVTVTIVPVEGRFQEARLMELSHDLTLAGWATDSNDPDSFFR 453

Query: 449 PLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAH 508
           PLLSC + R+  N + WCD  FD +L  AL + +   R++ Y QAQ IL ++ PV+PLA 
Sbjct: 454 PLLSCAAIRSQSNYAHWCDPTFDEVLQNALSSQQLSKRIDYYQQAQRILAEQLPVLPLAS 513

Query: 509 GIQFTAYSKSLTGIRISPFNVQPFNTVER 537
            ++  AY   + G+ +SPF    F  V R
Sbjct: 514 SLRLLAYRYDMKGLVLSPFGNASFAGVFR 542