Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., Peptide transport periplasmic protein SapA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  426 bits (1095), Expect = e-123
 Identities = 220/503 (43%), Positives = 306/503 (60%), Gaps = 1/503 (0%)

Query: 35  VYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVNSTGLEY 94
           VYC      TFNPQ A + +  D L  Q+Y+ LL +DP T+  V  LA SW V   G  Y
Sbjct: 1   VYCVSGQVNTFNPQKASSGLIVDTLAAQLYDRLLDVDPYTYRLVPELAESWEVLDNGATY 60

Query: 95  VFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNL 154
            F LR DV+FQ T WF+PTR LNADDVVF+F+RI D  +P+H +  + +P+F  + F + 
Sbjct: 61  RFHLRRDVSFQKTAWFTPTRKLNADDVVFTFQRIFDRRHPWHNINGSSFPYFDSLQFADN 120

Query: 155 LVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDNLPLGTG 214
           +  V  LD+ TV+F L++PD SFL ++AT +A ++S EYA QL   D +E LD  P+GTG
Sbjct: 121 VKSVRKLDNNTVEFRLTQPDASFLWHLATHYASVMSAEYAAQLSRKDRQELLDRQPVGTG 180

Query: 215 PFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVLNAPISS 274
           PF L+EY     IRL+RH  +W G   + QVV D+   GTG L+KLL  ECDVL  P +S
Sbjct: 181 PFQLSEYRAGQFIRLQRHDGFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS 240

Query: 275 QLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDSVYYGTG 334
           QL  +  +P + L   P MN+A++A NT  P LN+  VR AL  +IN Q ++ S+YYGT 
Sbjct: 241 QLTILRDDPRLRLTLRPGMNIAYLAFNTDKPPLNNPAVRHALALSINNQRLMQSIYYGTA 300

Query: 335 SIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPKAYNPSPRK 394
             A +ILP  SWAY  D     Y+   ++  L+  G    L L + VP   +A+NPSP K
Sbjct: 301 ETAASILPRASWAYDNDAKITEYNPQKSREQLKALGI-ENLTLHLWVPTSSQAWNPSPLK 359

Query: 395 TAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCD 454
           TAELIQA++A +GV + ++  +   ++   +  N DL LSGW  D+ DPD+F RPLLSC 
Sbjct: 360 TAELIQADMAQVGVKVVIVPVEGRFQEARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCA 419

Query: 455 SNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAHGIQFTA 514
           +  +  N + WC+ +FD +L  AL + +   R+  Y +AQNIL +E P++PLA  ++  A
Sbjct: 420 AINSQTNFAHWCNPEFDSVLRKALSSQQLASRIEAYEEAQNILEKELPILPLASSLRLQA 479

Query: 515 YSKSLTGIRISPFNVQPFNTVER 537
           Y   + G+ +SPF    F  V R
Sbjct: 480 YRYDIKGLVLSPFGNASFAGVSR 502